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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47072429_47073014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47072429 - 47073014

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

CTTTTCTTAGCC

Flanking Amino Acid:

HARTPENYPCKNLEENYCRN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

70.1

0.61

1.6

77.69

38.5

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030676

47026220 - 47084834

58615

ENSAPLT00000029792

47026220 - 47084834

58615

ENSAPLT00000022386

47026220 - 47084843

58624

ENSAPLT00000010620

47058510 - 47084834

26325

ENSAPLT00000039779

47026220 - 47081756

55537