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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47076056_47077936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47076056 - 47077936

Intron Length:

1881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TTCTTTGTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCTTCTTAATA

Flanking Amino Acid:

THPEAGLEHNYCRNPDGDVN

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

69.1

41.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

87.9

0.85

0.8

83.2

Minor 5ss

42.2

-0.9

2.9

56.7

Minor BPS

80.7

0.96

82.43

32.9

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030676

47026220 - 47084834

58615

ENSAPLT00000029792

47026220 - 47084834

58615

ENSAPLT00000022386

47026220 - 47084843

58624

ENSAPLT00000010620

47058510 - 47084834

26325

ENSAPLT00000039779

47026220 - 47081756

55537