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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47079683_47080472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47079683 - 47080472

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TAAACCTTAATT

Flanking Amino Acid:

SWPWQISLRTSFGLHFCGGT

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

64.9

40.7

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

76.1

0.59

40.8

Minor 5ss

37.1

-1.5

3.2

48.2

47.5

Minor BPS

76.3

0.9

1.2

83.34

37.2

Associated Gene:

Gene:

PLG

Ensembl Gene ID:

ENSAPLG00000010099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010620

47058510 - 47084834

26325

ENSAPLT00000042534

47026220 - 47084834

58615

ENSAPLT00000039779

47026220 - 47081756

55537

ENSAPLT00000029792

47026220 - 47084834

58615

ENSAPLT00000022386

47026220 - 47084843

58624