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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4710440_4712083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4710440 - 4712083

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATCTTGTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TATCATTTAATC

Flanking Amino Acid:

RLVPGYTSKECAKRFDELKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

66.2

0.37

1.1

61.2

43.8

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

0.39

1.4

70.13

34.8

Associated Gene:

Gene:

KIAA1841

Ensembl Gene ID:

ENSAPLG00000005956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006183

4692544 - 4712233

19690

ENSAPLT00000006180

4688827 - 4712233

23407