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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47151563_47151978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47151563 - 47151978

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATGCATTAAAT

Flanking Amino Acid:

ACLVTALIPADIYWLKLIAA

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

72.3

39.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

87.2

0.84

0.7

29.2

Minor 5ss

34.1

-1.8

2.9

36.4

40.6

Minor BPS

57.2

0.3

1.8

74.59

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008139

47148727 - 47160043

11317

ENSAPLT00000028803

47146806 - 47160043

13238