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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47152414_47152849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47152414 - 47152849

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

CTCCTATGAACA

Flanking Amino Acid:

NRKKMPSHFEDIKFEDDDEG

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

70.6

0.51

73.3

31.3

Major PPT

75.7

0.58

0.9

69.1

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

-0.1

1.7

58.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028803

47146806 - 47160043

13238

ENSAPLT00000008139

47148727 - 47160043

11317