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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47154086_47156214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47154086 - 47156214

Intron Length:

2129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTTCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAG

U12 Branch Point Sequence:

GGAGCTGTCAGT

Flanking Amino Acid:

KGCWTAGYILVTEVVGPQYR

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

33.5

Major BPS

49.4

-0

1.7

60.7

45.9

Major PPT

83.4

0.75

0.9

80.5

Minor 5ss

35.1

-1.7

2.7

41.3

45.2

Minor BPS

36.3

-1

2.4

49.38

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028803

47146806 - 47160043

13238

ENSAPLT00000008139

47148727 - 47160043

11317