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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47157582_47159632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47157582 - 47159632

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

GTCGTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGGCTTCTAACT

Flanking Amino Acid:

DYPGTSLVTEFNLVCEDSWK

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

80.2

0.68

0.9

76.9

37.4

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

53.1

0.17

1.7

70.42

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028803

47146806 - 47160043

13238

ENSAPLT00000008139

47148727 - 47160043

11317