Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_47170719_47171704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47170719 - 47171704

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

GTTTTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAA

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

GSWIFFHNGNSYYLNLCQRV

Intron Amino Acid Position:

1977

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

75.8

35.2

Major BPS

50.4

0.01

1.1

47.3

36.1

Major PPT

81.2

0.7

0.9

81.2

36.5

Minor 5ss

33.5

-1.9

2.8

42.9

38.5

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

IGF2R

Ensembl Gene ID:

ENSAPLG00000007173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007519

47161928 - 47215405

53478