Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_47191156_47191553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47191156 - 47191553

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCACTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TTTTCCTCACTC

Flanking Amino Acid:

PNTMDQYDLSSLAKSEKRGG

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

78.9

0.65

0.8

77.7

29.8

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

64.6

0.44

1.8

78.52

37.5

Associated Gene:

Gene:

IGF2R

Ensembl Gene ID:

ENSAPLG00000007173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007519

47161928 - 47215405

53478