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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47251959_47252128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47251959 - 47252128

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

GCTTTTATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTGCTTTTATT

Flanking Amino Acid:

QFILLSNKFKHVRRVLRNYK

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

69.9

34.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.9

0.74

0.9

76.7

36.2

Minor 5ss

35.2

-1.7

3.3

49.1

41.3

Minor BPS

58.6

0.35

1.7

74.98

42.6

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777