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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47255247_47256438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47255247 - 47256438

Intron Length:

1192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CATTTGTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCTCACACATCC

Flanking Amino Acid:

TLLEVYEVLCSNNLNPTDPT

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

80.5

0.69

0.9

77.3

36.7

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

41.1

-0.7

2.1

54.46

42.8

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777