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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47256780_47257014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47256780 - 47257014

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

GCTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTTTCATAACG

Flanking Amino Acid:

LHDKFYKPLPESYEEFKRNI

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.7

0.69

0.9

76.9

37.3

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

62.2

0.24

1.7

67.5

39.7

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777