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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47261896_47262793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47261896 - 47262793

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

ACATCACTATTT

Flanking Amino Acid:

SVQCFTVTQLGLAIFTKENS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

88.6

0.87

0.7

24.1

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

44.2

-0.3

2.1

61.26

42.4

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777