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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47262868_47262998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47262868 - 47262998

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCTG

5'SS Class:

major

3'SS Sequence:

TTTGTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTTCCCTCACCC

Flanking Amino Acid:

HSAVPQNNQPSLFDSPAERY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.7

44.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

82.6

0.73

80.6

Minor 5ss

33.7

-1.9

3.5

46.7

48.6

Minor BPS

54.1

0.11

1.9

68.24

43.3

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777