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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47263057_47263561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47263057 - 47263561

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGCT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTCTTTCTAACA

Flanking Amino Acid:

RDRVRSAAFLGLDMEFTGLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.8

40.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.76

0.8

29.6

Minor 5ss

33.1

-1.9

3.4

39.6

45.9

Minor BPS

63.8

0.43

1.6

75.11

36.7

Associated Gene:

Gene:

PNLDC1

Ensembl Gene ID:

ENSAPLG00000007014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007276

47251098 - 47264874

13777