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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47267351_47267941_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47267351 - 47267941

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCGAG

5'SS Class:

major

3'SS Sequence:

TTCTGAAAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTGTATTAACG

Flanking Amino Acid:

LDKMLVDDIGDVTITNDGAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

43.4

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.16

42.1

Minor 5ss

35.2

-1.7

3.3

38.1

46.8

Minor BPS

63.5

0.28

1.8

71.98

40.9

Associated Gene:

Gene:

TCP1

Ensembl Gene ID:

ENSAPLG00000006259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006535

47266407 - 47273418

7012