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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47268956_47269472_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

47268956 - 47269472

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

CTTAGCACTACAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTAACCTTAACT

Flanking Amino Acid:

KTSMSSKIIGIDGDFFANMV

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

60.6

40.8

Major BPS

100

1.24

0.5

100

Major PPT

70.9

0.47

62.3

38.5

Minor 5ss

90.1

1.35

1.1

85.5

31.8

Minor BPS

85.4

1.19

1.1

94.23

32.6

Associated Gene:

Gene:

TCP1

Ensembl Gene ID:

ENSAPLG00000006259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006535

47266407 - 47273418

7012