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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47269655_47269850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47269655 - 47269850

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTGTTGTGTACT

Flanking Amino Acid:

YALNCVVGSQGMTKRIVNAK

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

67.6

0.44

1.2

Major PPT

78.1

0.63

0.7

76.1

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

-0.2

2.4

71.97

44.9

Associated Gene:

Gene:

TCP1

Ensembl Gene ID:

ENSAPLG00000006259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006535

47266407 - 47273418

7012