Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_47276468_47276701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47276468 - 47276701

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCAG

5'SS Class:

major

3'SS Sequence:

TGTCATTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTTTGTCATT

Flanking Amino Acid:

TGTVTAANASGINDGAAVVI

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

64.9

42.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

75.1

0.56

0.9

68.7

Minor 5ss

26.7

-2.7

2.9

30.9

43.2

Minor BPS

46.1

-0.2

2.3

70.08

42.4

Associated Gene:

Gene:

ACAT2

Ensembl Gene ID:

ENSAPLG00000006048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038021

47270035 - 47281060

11026

ENSAPLT00000006281

47273688 - 47281060

7373