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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47277619_47278437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47277619 - 47278437

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATGTTAACT

Flanking Amino Acid:

AFYQYHMGITAENVANQWQI

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.2

0.84

0.7

84.7

30.2

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

66.3

0.59

2.1

88.22

36.9

Associated Gene:

Gene:

ACAT2

Ensembl Gene ID:

ENSAPLG00000006048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038021

47270035 - 47281060

11026

ENSAPLT00000006281

47273688 - 47281060

7373