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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47376759_47384070_F

Intron Information:

Intron Rank:

123552

Intron Class:

major

Intron Phase:

Intron Coordinates:

47376759 - 47384070

Intron Length:

7312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGTAT

U12 Branch Point Sequence:

TTTTCTGGGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

48.9

-0

1.5

45.4

Major PPT

79.3

0.66

0.9

73.2

36.2

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

46.8

-0.2

2.2

67.9

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044591

47376065 - 47401678

25614