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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47384130_47401487_F

Intron Information:

Intron Rank:

123551

Intron Class:

major

Intron Phase:

Intron Coordinates:

47384130 - 47401487

Intron Length:

17358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CCGACATTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

50.8

1.7

55.77

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044591

47376065 - 47401678

25614

ENSAPLT00000024097

47378883 - 47402500

23618