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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47482045_47483908_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47482045 - 47483908

Intron Length:

1864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATACTCT

5'SS Class:

weak_major

3'SS Sequence:

TTCATTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTGTTTCATT

Flanking Amino Acid:

SSSVSFITESDNPLLIVRPP

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

60.1

39.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

80.8

0.69

0.8

73.6

36.9

Minor 5ss

57.3

0.25

2.5

71.1

41.3

Minor BPS

51.6

0.13

2.2

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005572

47481935 - 47506496

24562