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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47490853_47493364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47490853 - 47493364

Intron Length:

2512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AAACTTCTAACT

Flanking Amino Acid:

YDIAGKKRFTAPYVTYLNKD

Intron Amino Acid Position:

966

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.2

0.63

0.8

70.7

36.1

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

50.4

0.09

1.6

66.61

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031743

47486887 - 47506496

19610

ENSAPLT00000005572

47481935 - 47506496

24562