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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47495576_47500178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47495576 - 47500178

Intron Length:

4603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTACATGACT

Flanking Amino Acid:

FDGLPECNAEVDTFSGLESD

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

75.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

87.4

0.84

0.6

85.2

22.3

Minor 5ss

-0.3

2.5

62.8

41.8

Minor BPS

60.6

0.41

1.9

81.5

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005572

47481935 - 47506496

24562

ENSAPLT00000031743

47486887 - 47506496

19610