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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47582601_47590886_F

Intron Information:

Intron Rank:

140031

Intron Class:

major

Intron Phase:

Intron Coordinates:

47582601 - 47590886

Intron Length:

8286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GAAACTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

75.5

0.57

74.4

40.4

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

65.1

0.55

1.3

71.81

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034578

47581223 - 47592063

10841

ENSAPLT00000023048

47581223 - 47592063

10841

ENSAPLT00000017707

47581223 - 47592063

10841