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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47695284_47698464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47695284 - 47698464

Intron Length:

3181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGCATT

5'SS Class:

major

3'SS Sequence:

CTGACCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTGCTCTGACCT

Flanking Amino Acid:

RVLQVLHQNNVELVNIGGTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

77.8

38.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.5

0.9

39.7

Minor 5ss

41.3

-1

3.1

56.9

Minor BPS

53.3

0.18

1.8

73.85

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027404

47691584 - 47714652

23069