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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47699612_47702979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47699612 - 47702979

Intron Length:

3368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTATTTTAATT

Flanking Amino Acid:

LAFNAVIHRHRPELFSWDEV

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.5

0.64

0.9

37.5

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

70.3

0.71

1.2

80.77

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027404

47691584 - 47714652

23069