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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47863157_47893109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47863157 - 47893109

Intron Length:

29953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

CCTTTTGCAAAA

Flanking Amino Acid:

TLQQQYDHCKALRRELKDKE

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

34.8

Major BPS

69.5

0.48

73.5

28.6

Major PPT

61.8

0.27

1.1

63.7

Minor 5ss

42.3

-0.9

2.8

52.9

38.3

Minor BPS

41.9

-0.6

2.1

51.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004750

47784580 - 47984659

200080