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Intron Name: Anas_platyrhynchos_platyrhynchos_3_47941025_47949504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47941025 - 47949504

Intron Length:

8480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

ATGAAATGAACT

Flanking Amino Acid:

SKGLLEEKYRYLFNEVAGPT

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

29.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

35.2

-1.7

45.1

42.9

Minor BPS

47.1

-0.1

1.9

67.02

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004750

47784580 - 47984659

200080