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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48084442_48110242_R

Intron Information:

Intron Rank:

130566

Intron Class:

major

Intron Phase:

Intron Coordinates:

48084442 - 48110242

Intron Length:

25801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CATTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTTCCCTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

77.7

0.69

83.3

27.7

Major PPT

81.3

0.7

0.8

77.6

30.8

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

74.1

0.75

1.7

85.03

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033025

48083564 - 48111148

27585