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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48120222_48121702_F

Intron Information:

Intron Rank:

125356

Intron Class:

major

Intron Phase:

Intron Coordinates:

48120222 - 48121702

Intron Length:

1481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGGAG

U12 Branch Point Sequence:

TTGTCTTTTGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

40.5

-0.6

1.5

34.8

34.9

Major PPT

82.5

0.73

0.9

77.3

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

43.6

-0.4

3.5

75.1

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041737

48118075 - 48121849

3775