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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4819396_4820468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4819396 - 4820468

Intron Length:

1073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACTCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ACTTCTTTACTC

Flanking Amino Acid:

VVKFEFDGIEIDLVFARLSM

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

71.9

0.49

31.7

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

0.36

1.6

67.85

38.7

Associated Gene:

Gene:

PAPOLG

Ensembl Gene ID:

ENSAPLG00000006813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007147

4818009 - 4823689

5681