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Intron Name: Anas_platyrhynchos_platyrhynchos_3_4820523_4822607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4820523 - 4822607

Intron Length:

2085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

CTCTCCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTCTCCTTTACA

Flanking Amino Acid:

KHQEEIKNLRAVEDAYVPVV

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.5

43.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.1

0.79

0.7

79.2

26.4

Minor 5ss

-1.1

2.8

45.2

43.7

Minor BPS

69.8

0.62

1.7

75.21

42.3

Associated Gene:

Gene:

PAPOLG

Ensembl Gene ID:

ENSAPLG00000006813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007147

4818009 - 4823689

5681