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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48275027_48285532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48275027 - 48285532

Intron Length:

10506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

TTTCTTCACTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

CTTTTCTTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

54.1

45.2

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

82.1

0.72

0.8

81.6

29.3

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

71.3

0.75

1.7

86.99

39.2

Associated Gene:

Gene:

FBXO30

Ensembl Gene ID:

ENSAPLG00000014234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042142

48271848 - 48286491

14644