Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_48276937_48281646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48276937 - 48281646

Intron Length:

4710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGC

5'SS Class:

major

3'SS Sequence:

TGGCTCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTTTTCTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

58.1

42.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.1

0.65

0.9

37.3

Minor 5ss

-1.7

3.6

49.7

46.9

Minor BPS

75.4

0.88

1.4

88.41

36.6

Associated Gene:

Gene:

FBXO30

Ensembl Gene ID:

ENSAPLG00000014234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023567

48271848 - 48281751

9904