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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48318078_48318872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48318078 - 48318872

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

SVQELSRCQLPHKLFHETVR

Intron Amino Acid Position:

1680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

64.4

42.2

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

42.2

-0.9

2.8

55.2

43.3

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040942

48318015 - 48361428

43414