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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48318078_48319353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48318078 - 48319353

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

MQTMLKTVDRSHTSSSMKQS

Intron Amino Acid Position:

1665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

35.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

34.3

-1.8

3.4

50.5

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014869

48317981 - 48361428

43448