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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48323294_48331060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48323294 - 48331060

Intron Length:

7767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTTGTATTT

Flanking Amino Acid:

ANQEDDIPVKGSHSTKVEAV

Intron Amino Acid Position:

1519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.8

0.45

1.1

70.5

39.1

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

50.7

0.1

2.2

78.46

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414

ENSAPLT00000014869

48317981 - 48361428

43448