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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48331250_48332394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48331250 - 48332394

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCCTACATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATT

Flanking Amino Acid:

PICARQLGKQWAVLTCGHCF

Intron Amino Acid Position:

1456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.5

0.39

0.9

62.3

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

71.4

0.75

1.4

87.38

32.1

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414

ENSAPLT00000014869

48317981 - 48361428

43448