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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48349445_48352798_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48349445 - 48352798

Intron Length:

3354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CAAATCCATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TCTTCGCTAATG

Flanking Amino Acid:

HVRSSSLRVLVYQGVKKHGF

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

79.6

29.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

58.9

0.2

37.6

Minor 5ss

41.7

-0.9

3.1

53.2

Minor BPS

49.1

-0.2

2.4

63.6

44.7

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014869

48317981 - 48361428

43448

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414