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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48353495_48353894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48353495 - 48353894

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTTGTTTAATT

Flanking Amino Acid:

QKRRERTKEQIARTSERTQK

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

85.9

0.81

0.7

81.6

29.9

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

68.5

0.66

1.7

82.98

39.3

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414

ENSAPLT00000014869

48317981 - 48361428

43448