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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48354912_48355683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48354912 - 48355683

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CACTGTTTAATG

Flanking Amino Acid:

IKQDDLTLPEGKLVNFFVPP

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

71.3

0.48

0.9

36.5

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

49.6

-0.1

1.9

51.34

44.1

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014869

48317981 - 48361428

43448

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414