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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48357253_48359134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48357253 - 48359134

Intron Length:

1882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTGA

5'SS Class:

major

3'SS Sequence:

TGGGTGTATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

ATCTCTTGAATG

Flanking Amino Acid:

MEKFYSFIIPDVLEEDEEES

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.8

40.1

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

65.1

0.34

1.1

57.6

46.7

Minor 5ss

43.3

-0.7

2.9

56.8

47.3

Minor BPS

60.6

0.19

1.5

62.23

40.3

Associated Gene:

Gene:

SHPRH

Ensembl Gene ID:

ENSAPLG00000014248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043825

48318738 - 48361428

42691

ENSAPLT00000040942

48318015 - 48361428

43414

ENSAPLT00000014869

48317981 - 48361428

43448