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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48532361_48536021_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48532361 - 48536021

Intron Length:

3661

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCATGTCAA

5'SS Class:

major

3'SS Sequence:

CATCCCTGTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TTTTCTGTACAC

Flanking Amino Acid:

HSERSMSQKGYLQWSNIESI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

58.4

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

59.6

0.22

1.1

59.1

35.7

Minor 5ss

28.9

-2.4

3.8

31.8

42.6

Minor BPS

-0.1

2.3

70.99

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015102

48532283 - 48538467

6185