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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48778955_48795832_F

Intron Information:

Intron Rank:

126385

Intron Class:

major

Intron Phase:

Intron Coordinates:

48778955 - 48795832

Intron Length:

16878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TCTTCTTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

0.6

1.2

75.9

36.3

Major PPT

71.5

0.48

1.1

72.2

36.9

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

61.7

0.36

1.7

71.99

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042563

48778745 - 48796484

17740