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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48778955_48815241_F

Intron Information:

Intron Rank:

126381

Intron Class:

major

Intron Phase:

Intron Coordinates:

48778955 - 48815241

Intron Length:

36287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTAATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGCTGTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

80.6

0.69

0.9

73.3

40.8

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

62.1

0.46

1.8

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026706

48778745 - 48827893

49149