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Intron Name: Anas_platyrhynchos_platyrhynchos_3_48961057_48963136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48961057 - 48963136

Intron Length:

2080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TAACTTTTATTT

Flanking Amino Acid:

GSIKFWDASAITLQVLYKLK

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

67.5

0.39

0.9

58.4

43.1

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

0.14

1.5

66.83

38.2

Associated Gene:

Gene:

STXBP5

Ensembl Gene ID:

ENSAPLG00000014903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044674

48922296 - 48996988

74693

ENSAPLT00000034036

48922296 - 48996988

74693

ENSAPLT00000015563

48922182 - 48996988

74807

ENSAPLT00000047079

48922296 - 48996988

74693

ENSAPLT00000015560

48922296 - 48996739

74444

ENSAPLT00000045183

48922296 - 48996988

74693