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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49276679_49474898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49276679 - 49474898

Intron Length:

198220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCACCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

CTTGTCTCCACC

Flanking Amino Acid:

DGLGKHFVAVDGSLGNIDDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

65.2

0.34

0.8

59.3

31.3

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

47.2

-0.2

2.1

61.43

44.4

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385